Re: Removing the blindness

From: Alexander Conley (AJConley@lbl.gov)
Date: Fri Oct 15 2004 - 10:24:45 PDT

  • Next message: Alexander Conley: "Re: Removing the blindness"

    Hi Chris,'

       Thanks for the response.

    Fig 3: Yes, the diagram can probably be made clearer. Greg made
       a similar suggestion.

    High-z residuals: I will look into it. I should note that Fig 30 is
    the Bmax
       resids and Fig 28 is the CMAG resids. Looking at the method paper,
    that
       isn't made clear at all, so I will fix the captions.
       In fact, they aren't histograms -- they are ideograms.

    In some sense an ideogram is the continuous limit of a histogram.
    Assuming
      that you know your measurement errors are gaussian (or, more
    generally, if
      you know the pdf of your error distributions), you construct an
    ideogram
      by adding one gaussian (of the appropriate sigma) at the position of
    each
      measurement. One problem with histogramming things is that you loose
    information
      about the relative errors of each measurement. An ideogram tries to
    get around
      this. At least in theory it provides more information than a
    histogram, because a
      poor measurement is not treated on equal footing with a good one.

    For some reason this term is widely known among particle physics types,
    but
      not astronomers -- which doesn't explain why I had heard of them.
    Maybe it's because
      I'm surrounded by particle physics types.

    Lightcurve fits:
       I think that was wishful thinking on Saul's part. The only real
    argument that was
       presented to me was that if they had made that mistake, surely they
    would have
       noticed it in the residuals from the lightcurve fits. This error
    probably would
       have affected 2-3 of the Hamuy SNe at most. While trying to verify
    if the mistake
       had been made, Greg and I discovered a different mistake of around
    the same
       size that definitely affected 8 of the 18 Hamuy SNe in P99 -- and
    nobody detected
       it. We will never know if anybody was aware of the first problem in
    P99 because
       the second problem (which absolutely happened) sits 'on top of' the
    first one.

    Alex

    On Oct 15, 2004, at 9:57 AM, Chris Lidman wrote:

    > Dear Alex,
    > Many thanks for your e-mail. I have read your reply in detail and
    > I am satisfied with your answers. I have some additional, minor
    > comments for you to consider.
    >
    > Cheers, Chris.
    >
    > Figure 3
    > --------
    >
    > To make this figure a little clearer, you might want to add arrows
    > linking the line ends so that readers can see more clearly how the
    > lines move.
    >
    > A comment on the high redshift residuals
    > -----------------------------------------
    >
    > The SNe you use from Rob's paper are
    >
    > 97eq
    > 98as
    > 98aw
    > 98ax
    > 98ba
    > 00fr
    >
    > Note that 98as, 98ax and 98aw were excluded from Rob's low extinction
    > subset. Do these 3 SNe dominate the rightmost blue histogram in figure
    > 30 of your methods paper? If this is the case, then this
    > adds extra support to the notion that extinction is the cause in
    > the split of the high redshift residuals.
    >
    > Section 4
    > ---------
    >
    > Second paragraph.
    >
    > ... joint fit is preferred.
    >
    > I think that this needs to be stronger
    >
    > ... joint fit is used.
    >
    > Lightcurve fits
    > ---------------
    >
    > There was an earlier discussion on the behaviour of the snminuit
    > program
    > that
    > may have affected the V band fits in P99. Saul mentioned that this
    > feature may have already been known. Was this actually the case? I have
    > lost the thread of the discussion since Saul's e-mail.
    > See http://supernova.lbl.gov/collab/archive/cmag/0020.html.
    >
    > Figure 2
    > --------
    >
    > Ideogram. I am not familiar with the way in which this word is used in
    > the
    > figure caption. From the Webster dictionary
    >
    >
    > \I*de"o*gram\, n. [Ideo- + -gram; cf. F. id['e]ograme.]
    > 1. An original, pictorial element of writing; a kind of
    > hieroglyph expressing no sound, but only an idea.
    >
    > Ideograms may be defined to be pictures intended to
    > represent either things or thoughts. --I. Taylor
    > (The
    > Alphabet).
    >
    > You might even have a history without language
    > written or spoken, by means of ideograms and
    > gesture. --J. Peile.
    >
    > 2. A symbol used for convenience, or for abbreviation; as, 1,
    > 2, 3, +, -, ?, $, ?, etc.
    >
    > 3. A phonetic symbol; a letter.
    >
    >
    >
    > On Wed, 2004-10-13 at 18:16, Alexander Conley wrote:
    >> Hello all,
    >>
    >> I have finished (I hope) trying to answer all of the questions that
    >> you
    >> have asked me about my analysis. What I need from you is for you all
    >> to tell me if you are satisfied with my attempt at an answer, or if I
    >> need
    >> to look at a particular issue more deeply.
    >>
    >> There is a new version of the paper (1.32) available in the usual
    >> place
    >> ( http://panisse.lbl.gov/~aconley/cmag ) which incorporates many of
    >> the
    >> changes you suggested, plus a few more.
    >>
    >> The biggest change is that probcut is no more. I discovered a subtle
    >> bias that probcut was introducing in the analysis (it tended to punish
    >> extremely well observed low redshift SNe with slopes that were a bit
    >> away from the central value). I ended up excluding 2 low-z SNe by
    >> hand
    >> that probcut had been catching: 97br, 97bp. Their data appears to
    >> be internally inconsistent, with a much larger degree of scatter than
    >> can be accounted for by their quoted photometric errors.
    >>
    >> There is also a (blinded) w fit. I haven't combined it with the other
    >> priors, but there isn't much point in doing so in blind mode anyways.
    >> Finally, I started putting the systematic errors together, although
    >> the
    >> job isn't done yet.
    >>
    >> Below I have listed all of you in alphabetical order and tried to give
    >> a brief response to each of the questions you asked of me.
    >>
    >> Ariel:
    >> Original message:
    >> http://supernova.lbl.gov/collab/archive/cmag/0006.html
    >>
    >> Q: Have you tried not applying the MW extinction correction and
    >> seeing
    >> if that behaves as you expect?
    >> A: As expected, the m_B residuals (as measured by the RMS) got
    >> much
    >> worse and the B_BV residuals did not.
    >> More info:
    >> http://supernova.lbl.gov/collab/archive/cmag/0010.html
    >>
    >> Q: Why do you set s_B = s_V for some fits but not for others?
    >> A: I think it would be internally inconsistent to force s_B=s_V
    >> given what
    >> we know from CMAGIC -- namely, that when there is a bump,
    >> s_V <
    >> s_B.
    >> Note that I have only allowed s_B ne s_V when there is a
    >> bump.
    >> And it's not like the s_B = s_V fits to SNe with bumps are
    >> good
    >> -- most
    >> of them are absolutely awful, clearly missing the shape of
    >> the
    >> light curve.
    >> On a related note, on Saul's urging I did redo all fits so
    >> that
    >> s_B was fit
    >> to the B data only, and found that using these values for
    >> stretch, etc. made
    >> very little difference. See Saul's section below.
    >> More info:
    >> http://supernova.lbl.gov/collab/archive/cmag/0007.html
    >>
    >> Q: If the split in the high redshift residuals (between the Knop
    >> and
    >> Barris sample)
    >> is really due to dust, can you see this in the residuals of
    >> m_B vs B_BV?
    >> A: Yes, the matched residuals are consistent with this story.
    >> This
    >> is probably
    >> my single greatest area of concern with my result -- but I'm
    >> not sure what
    >> to do about it. Note that if a 'by-hand' extinction
    >> correction is applied, the
    >> sample no longer splits.
    >> More info:
    >> http://supernova.lbl.gov/collab/archive/cmag/0007.html
    >>
    >> Q: Have you tried to set limits on intergalactic dust?
    >> A: No, but we can talk about this after the blindness comes off.
    >>
    >> Chris:
    >> Original email:
    >> http://supernova.lbl.gov/collab/archive/cmag/0001.html
    >>
    >> Q: Could you add a stretch vs. scriptM plot?
    >> A: Done
    >>
    >> Q: You seem less sensitive to the U-enhanced K-correction
    >> systematic
    >> than K03. Could you emphasize this more?
    >> A: Am I? K03 was completely insensitive to changing the U-B
    >> color of
    >> the uberspectrum as long as an extinction correction was
    >> not
    >> applied,
    >> and very sensitive when one was. I don't apply a
    >> extinction
    >> correction,
    >> and my sensitivity lies somewhere between the two K03
    >> values.
    >> See the latest version of the paper for actual numbers.
    >>
    >> Q: s_B ne s_V?
    >> A: Ariel also asked this (although you beat him to the punch).
    >> See the
    >> answer in his section.
    >>
    >> Greg:
    >> Greg's comments:
    >> http://supernova.lbl.gov/collab/archive/cmag/0013.html
    >> Greg had many comments. I won't be able to hit them all here.
    >> See
    >> http://supernova.lbl.gov/collab/archive/cmag/0013.html for
    >> many
    >> of my responses.
    >> Some highlights, and things I didn't get to in that email.
    >>
    >> Q: The first 3 high redshift SNe all seem high. Is their
    >> anything
    >> funny with them?
    >> A: Nothing I can find. They come from 3 different reductions
    >> (P99, K03 and Riess 98).
    >> Applying a by-hand extinction correction does not save
    >> them.
    >> They are also
    >> all high in a maximum magnitude fit. There was a problem
    >> with one of the
    >> lightcurve points for SN1995ba (a photometry error -- I
    >> have
    >> informed Rob),
    >> but that doesn't really 'save' it.
    >>
    >> Q: Can you break up the residuals by various subsamples and see
    >> if
    >> they
    >> differ.
    >> A: By photometry source: The SCP and hi-z team samples are
    >> quite
    >> compatible
    >> in terms of mean and scatter. SCP mean: 0.025 avdev:
    >> 0.183 rms: 0.218
    >> high-z team mean: 0.006 avdev: 0.183 rms: 0.233. The
    >> Hawaii (basically
    >> Barris) sample has an offset mean and lower rms --
    >> mean:
    >> -0.13
    >> avdev: 0.11 rms: 0.19. The offset is well documented
    >> (the split in the
    >> residuals) -- see Ariel's section.
    >> By redshift: Split into three chunks: [0,0.45),
    >> [0.45,0.55),[0.55) (to get roughly
    >> equal numbers of SNe), they are consistent. The RMS
    >> gets
    >> marginally
    >> smaller at the high redshift end (0.23 -> 0.17), but I
    >> expect this to some
    >> extent because the mean extinction will be lower
    >> because
    >> of selection effects.
    >> Summary: I see no evidence for any real problems, except
    >> the already noted
    >> shift in the mean between the Barris sample and
    >> everybody
    >> else (which seems
    >> to arise because the Barris sample has unusually little
    >> host galaxy extinction).
    >>
    >> Q: In the matched residuals (m_B vs B_BV) is the distribution
    >> narrowing as you
    >> move towards positive residuals? Do bump SNe have
    >> anything
    >> to do with this?
    >> A: Splitting the sample in half, the lower RMS is 0.16, the
    >> upper
    >> is 0.15, so it is
    >> slightly narrower, but not by much. Removing all of the
    >> SNe with bumps
    >> decreases the RMS values slightly to lower: 0.16 upper:
    >> 0.14.
    >> On a related note, of the 8 SNe with bumps, 6 have
    >> positive residuals.
    >> This is significant at the 1.4 sigma (equiv: 14.4%)
    >> level,
    >> according to
    >> the binomial distribution. Bottom line: This doesn't
    >> seem
    >> significant.
    >>
    >> Q: What does the chisquare distribution for the fits to the
    >> CMAG
    >> relations look like?
    >> A: Too good -- as expected. This is why W03 rescaled their
    >> error
    >> bars -- people
    >> are clearly underestimating them. I decided that the
    >> rescaling was far too
    >> dangerous given the quality of the high-z data. The plot
    >> of
    >> the chisq probability
    >> (the prob that the chisq should be higher than it is
    >> observed to be) is
    >> attached. It is very difficult to say what this
    >> distribution should look like because
    >> it is different for every number of points in the CMAG
    >> region, but it's fair
    >> to say it should be peaked around 0.5. The big spike at
    >> around 1 is a bunch
    >> of SNe that are too well fit.
    >>
    >> ______________________________________________________________________
    >>
    >> Mark:
    >> Original email:
    >> http://supernova.lbl.gov/collab/archive/cmag/0011.html
    >> Q: Could you include the intrinsic error in the stretch vs
    >> scriptM
    >> plot?
    >> A: Done
    >> Q: How about propogating the z error into the vertical error bars
    >> in the
    >> Hubble residual plots?
    >> A: Done
    >> Q: On the resid vs. resid plot, do you take the errors into
    >> account when
    >> calculating the pearson's coefficient?
    >> A: Not yet, but I think this can wait until after the blindness
    >> is
    >> removed
    >> (since that shouldn't affect these values).
    >>
    >>
    >> Saul:
    >>
    >> Q: Could you do a blinded w fit?
    >> A: Done. See the most recent version of the paper. The blindness
    >> scheme
    >> is a bit rough given the almost pathological shape of the
    >> error contours.
    >> I have not combined these contours with the other priors
    >> yet,
    >> but there is
    >> no point in doing so now. Adding the priors and then
    >> blinding
    >> would probably allow the blindness scheme to be violated,
    >> so I
    >> won't do it.
    >> More info:
    >> http://supernova.lbl.gov/collab/archive/cmag/0021.html
    >>
    >> Q: Could you redo all of the lightcurve fits using the
    >> prescription
    >> of P99 --
    >> that is, do a B only fit, then fix the stretch and date of
    >> maximum to those values
    >> for the V fit.
    >> A: Done. Didn't make a difference (see the most recent version
    >> of
    >> paper). As
    >> detailed at great length in
    >>
    >> http://supernova.lbl.gov/collab/archive/deepnews/1361.html
    >> a very long and boring email which nobody probably read,
    >> this
    >> is (a) harder
    >> than it looks, and (b) wasn't done right in P99. Luckily it
    >> only affects the V
    >> magnitudes, so doesn't change fit C. Note that I didn't
    >> follow this prescription
    >> for the 8 bump SNe, since the quality of the fit in that
    >> case
    >> is god-awful.
    >>
    >> Q: What effect does applying an extinction correction have?
    >> A: It shifts the contours almost purely along the long axis
    >> inward
    >> (by 0.4ish).
    >> Note that this fit can NEVER be published. It's a piece of
    >> junk found by
    >> combining lots of extinction values that other people
    >> calculated, and so
    >> is horribly internally inconsistent.
    >>
    >> Q: What effect does removing all SNe with bumps have?
    >> A: A shift of 0.016 along the short axis and -0.14 along the
    >> long
    >> axis, giving
    >> lower values of om, ol, but a slightly higher value
    >> (+0.016)
    >> for om in a flat
    >> universe. Not a really large systematic.
    >>
    >> Vitaliy:
    >> Original email:
    >> http://supernova.lbl.gov/collab/archive/cmag/0015.html
    >> Q: Are you going to combine the shifts into a final systematic
    >> error?
    >> A: Yes. I have started doing this in the latest paper draft.
    >>
    >> Okay -- hopefully I didn't miss anything. Please let me know if you
    >> are
    >> happy with my answers, and if not, what I can do to try and answer
    >> your
    >> questions better. Then, the blindness can be removed.
    >>
    >> Alex
    > --
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    > Alonso de Córdova 3107, Vitacura
    > Casilla 19001, Santiago 19
    > CHILE
    >
    > Ph. +56 2 463 3106
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    >



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